Jianwei Shuai

Latest

• Gene function and cell surface protein association analysis based on single-cell multiomics data
• Modeling and analyzing single-cell multimodal data with deep parametric inference
• Predicting potential interactions between lncRNAs and proteins via combined graph auto-encoder methods
• XBound-Former: Toward Cross-scale Boundary Modeling in Transformers
• Development and validation of an interpretable radiomic nomogram for severe radiation proctitis prediction in postoperative cervical cancer patients
• The spring-like effect of microRNA-31 in balancing inflammatory and regenerative responses in colitis
• Measuring depression severity based on facial expression and body movement using deep convolutional neural network
• Predicting potential interactions between lncRNAs and proteins via combined graph auto-encoder methods
• Assembly of Guanine Crystals as a Low-Polarizing Broadband Multilayer Reflector in a Spider,Phoroncidia rubroargentea
• Caspase-1 and Gasdermin D Afford the Optimal Targets with Distinct Switching Strategies in NLRP1b Inflammasome-Induced Cell Death
• CITEMO XMBD: A flexible single-cell multimodal omics analysis framework to reveal the heterogeneity of immune cells
• Temperature-optimized propagation of synchronous firing rate in a feed-forward multilayer neuronal network
• Dormant Nfatc1 reporter-marked basal stem progenitor cells contribute to mammary lobuloalveoli formation
• Mosaic composition of RIP1–RIP3 signalling hub and its role in regulating cell death
• MSSort-DIA XMBD: A deep learning classification tool of the peptide precursors quantified by OpenSWATH
• Network modeling-based identification of the switching targets between pyroptosis and secondary pyroptosis
• Effect of Ag doping on bipolar switching operation in molybdenum trioxide (MoO3) nanostructures for non-volatile memory
• Quantifying the optimal strategy of population control of quorum sensing network in Escherichia coli
• Cell death modes are specified by the crosstalk dynamics within pyroptotic and apoptotic signaling
• Formation of oxygen vacancies in Li2FeSiO4:first-principles calculations
• Cuffless blood pressure estimation based on composite neural network and graphics information
• Deep representation features from DreamDIAXMBD improve the analysis of data-independent acquisition proteomics
• Shannon entropy for time-varying persistence of cell migration
• A Review of Methods for Sleep Arousal Detection Using Polysomnographic Signals
• Biological gel-based microchamber array for tumor cell proliferation and migration studies in well-controlled biochemical gradients
• Deriving time-varying cellular motility parameters via wavelet analysis
• Microscopic origins of the crystallographically preferred growth in evaporation-induced colloidal crystals
• Biphasic regulation of transcriptional surge generated by the gene feedback loop in a two-component system
• Different response modes and cooperation modulations of blue-light receptors in photomorphogenesis
• RIP1-dependent linear and nonlinear recruitments of caspase-8 and RIP3 respectively to necrosome specify distinct cell death outcomes
• Roles of four feedback loops in mitochondrial permeability transition pore opening induced by Ca^{2+} and reactive oxygen species
• Memristors: Understanding, Utilization and Upgradation for Neuromorphic Computing
• The Oscillation Amplitude, Not the Frequency of Cytosolic Calcium, Regulates Apoptosis Induction
• The Oscillation Amplitude, Not the Frequency of Cytosolic Calcium, Regulates Apoptosis Induction
• Enhanced vibrational resonance in a single neuron with chemical autapse for signal detection
• Roles of four feedback loops in mitochondrial permeability transition pore opening induced by Ca^{2+} and reactive oxygen species
• The Msi1-mTOR pathway drives the pathogenesis of mammary and extramammary Paget’s disease
• Data-Driven Modeling Identifies TIRAP-Independent MyD88 Activation Complex and Myddosome Assembly Strategy in LPS/TLR4 Signaling
• Systematic Assessment of the Effect of Internal Library in Targeted Analysis of SWATH-MS
• Poor Prognosis With Coexistence Of EGFR T790M Mutation And Common EGFR-Activating Mutation In Non- Small Cell Lung Cancer
• Poor Prognosis With Coexistence Of EGFR T790M Mutation And Common EGFR-Activating Mutation In Non- Small Cell Lung Cancer
• Morphological quantification of proliferation to invasion transition in tumor spheroids
• Quantitative heterogeneity and subgroup classification based on motility of breast cancer cells
• Morphological quantification of proliferation to invasion transition in tumor spheroids
• MicroRNA-31 Reduces Inflammatory Signaling and Promotes Regeneration in Colon Epithelium, and Delivery of Mimics in Microspheres Reduces Colitis in Mice
• Poor Prognosis With Coexistence Of EGFR T790M Mutation And Common EGFR-Activating Mutation In Non- Small Cell Lung Cancer
• Modeling three-dimensional invasive solid tumor growth in heterogeneous microenvironment under chemotherapy
• 细菌群体感应机制的动力学建模研究
• Wave failure at strong coupling in intracellular Ca2+ signaling system with clustered channels
• Insensitivity of synchronization to network structure in chaotic pendulum systems with time-delay coupling
• MiR-31 promotes mammary stem cell expansion and breast tumorigenesis by suppressing Wnt signaling antagonists
• Conformational dynamics of the essential sensor histidine kinase WalK
• Regulation of 1, 4, 5-triphosphate receptor channel gating dynamics by mutant presenilin in Alzheimer’s disease cells
• Stress responsive miR-31 is a major modulator of mouse intestinal stem cells during regeneration and tumorigenesis
• Msi2 Maintains Quiescent State of Hair Follicle Stem Cells by Directly Repressing the Hh Signaling Pathway
• Effect of Dynamic Interaction between microRNA and Transcription Factor on Gene Expression
• Comparison of gating dynamics of different IP3 R channels with immune algorithm searching for channel parameter distributions
• Suppressing effect of Ca2+ blips on puff amplitudes by inhibiting channels to prevent recovery
• Synonymous mutations in oncogenesis and apoptosis versus survival unveiled by network modeling
• 钙离子通道和钙信号震荡模型研究
• Channel based generating function approach to the stochastic Hodgkin-Huxley neuronal system
• Alzheimer’s disease via enhanced calcium signaling caused by the decrease of endoplasmic reticulum–mitochondrial distance
• Accurate Langevin approaches to simulate Markovian channel dynamics
• Deletion of the tyrosine phosphatase Shp2 in Sertoli cells causes infertility in mice
• Conformational Dynamics of Response Regulator RegX3 from Mycobacterium tuberculosis
• Resonance induced by a spatially periodic force in the reaction-diffusion system
• Effects of extracellular potassium diffusion on electrically coupled neuron networks
• Enhanced multiple vibrational resonances by Na1 and K1 dynamics in a neuron model
• Optimal microdomain crosstalk between endoplasmic reticulum and mitochondria for Ca21 oscillation
• Enhanced multiple vibrational resonances by Na1 and K1 dynamics in a neuron model
• The 3-dimensional cellular automata for HIV infection
• Langevin approach for stochastic Hodgkin–Huxley dynamics with discretization of channel open fraction
• 应用免疫算法研究肌醇 1,4,5鄄磷酸三酯 受体通道模型参数分布特性
• Channel-based Langevin approach for the stochastic Hodgkin-Huxley neuron
• Molecular Communication and Networking:Opportunities and Challenges
• Active generation and propagation of Ca2+ signals within tunneling membrane nanotubes
• Coherent calcium puff signals driven by intracellular noises
• Intercellular signaling in glial cells: Calcium waves and oscillations in response to mechanical stimulation and glutamate
• Entropically modified spiking ability and periodicity in clustered channels
• Biological excitable media based on non-excitable cells and calcium signaling
• Ca2+ Puffs Originate from Preestablished Stable Clusters of Inositol Trisphosphate Receptors
• Modeling Ca21 Feedback on a Single Inositol 1,4,5-Trisphosphate Receptor and Its Modulation by Ca21 Buffers
• A Kinetic Model of Single and Clustered IP3 Receptors in the Absence of Ca21 Feedback
• ‘Trigger’ Events Precede Calcium Puffs in Xenopus Oocytes
• The Number and Spatial Distribution of IP3 Receptors Underlying Calcium Puffs in Xenopus Oocytes
• Optical single-channel recording by imaging Ca2+ flux through individual ion channels: theoretical considerations and limits to resolution