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204. Ligang Zhu, Xiang Li, Fei Xua, Zhiyong Yin, Jun Jin, Zhilong Liu , Hong Qi, Jianwei
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203. Yiming Li , Qingzu He, Huan Guo, Chuan-Qi Zhong , Xiang Li, Yulin Li, Jiahuai Han* ,
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202. Chenggui Yao, Fei Xu , Jianwei Shuai , Xiang Li,∗. Temperature-optimized propagation of
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201. Huan Hu, Ruiqi Liu, Chunlin Zhao, Yuer Lu, Yichun Xiong, Lingling Chen, Jun Jin,
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Shuai. CITEMOXMBD: A flexible single-cell multimodal omics analysis framework to reveal the
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200. Yuning Wu, Qin Wang,
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199. Ye Qiu, Dongdong Liu, Guoyu Yang,
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198. 何情祖,钟传奇,李翔, 帅建伟* ,韩家淮* .
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197. Xiangyu Qian, Ye Qiu, Qingzu He, Yuer Lu, Hai Lin, Fei Xu, Fangfang Zhu, Zhilong Liu,
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196. Zhiyong Yin, Pei-pei Zhang, Fei Xu, Zhilong Liu, Ligang Zhu, Jun Jin, Hong Qi, Jianwei
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195. Jingru Yao,# Guoqiang Li,# Yang Jiao, Yu Zheng,
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194 Yanping Liu, Yang Jiao, Qihui Fan, Yu Zheng, Guoqiang Li, Jingru Yao, Gao Wang,
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193. Zhiliang Lyu† , Zhijin Wang† , Fangfang Luo , Jianwei Shuai* and Yandong Huang*.
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192. Yanping Liu, Yang Jiao, Da He, Qihui Fan , Yu Zheng, Guoqiang Li, Gao Wang, Jingru
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191. 林友辉, 张志森, 郭文熹, 吴建洋,曹学正,陈虎,帅建伟,吴晨旭*. 典型软物质体系的结构,性质及其应用[J].
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189. Wen Liu, Xiang Li, Hong Qi, Yuning Wu, Jing Qu, Zhiyong Yin, Xuejuan Gao, Aidong
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188. Bharathi, Mohanbabu; Balraj, Babu; Sivakumar,
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187. 李翔, 祁宏, 黄艳东, 帅建伟*，钙离子信号及细胞调控信号网络动力学，中国科学: 物理学力学天文学，51， 030010
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186. Mingxuan Gao, Wenxian Yang, Chenxin Li, Yuqing Chang, Yachen Liu, Qingzu He, Chuan-Qi
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185. Xiang Li#, Chuan-Qi Zhong#, Rui Wu#, Xiaozheng Xu, Zhang-Hua Yang, Shaowei Cai, Xiurong
Wu, Xin Chen, Zhiyong Yin, Qingzu He, Dianjie Li, Fei Xu, Yihua Yan, Hong Qi, Changchuan Xie,
Jianwei Shuai*, Jiahuai Han*. RIP1-dependent linear and nonlinear recruitments of caspase-8 and
RIP3 respectively to necrosome specify distinct cell death outcomes. Protein &
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184. Ling Li, Carl Goodrich, Haizhao Yang, Katherine R. Phillips, Zian Jia, Hongshun Chen,
Lifeng Wang, Jinjin Zhong, Anhua Liu, Jianfeng Lu, Jianwei Shuai, Michael P. Brenner, Frans
Spaepen, and Joanna Aizenberg. Microscopic origins of the crystallographically preferred growth
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183. L. H. Zhang, M. J. Cheng, X. H. Shi, J. W. Shuai, and Z. Z. Zhu, Bain and
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182. 邓亚彬; 王志伟; 赵晨晖; 李琳; 贺珊; 李秋红; 帅建伟; 郭东辉*.类脑神经网络与神经形态器件及其电路综述, 计算机应用研究,
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181. 刘博雯; 帅建伟; 曹玉萍. 面部表情识别技术在精神疾病诊疗中的应用, 中华行为医学与脑科学杂志, 2021, 30(10):
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180. Xu, Fei; Yin, Zhiyong; Zhu, Ligang; Jin, Jun; He, Qingzhu; Li, Xiang*; Shuai, Jianwei.
Oscillations Governed by the Incoherent Dynamics in Necroptotic Signaling. Frontiers in
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179. Zhang, Lihong; Wu, Shunqing; Shuai, Jianwei; Hou, Zhufeng*; Zhu, Zizhong*. Formation of
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178. Li, Xiang; Jin, Jun; Zhang, Xiaocui; Xu, Fei; Zhong, Jinjin; Yin, Zhiyong; Qi, Hong;
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177. Qi, Hong*; Shi, Zhi-Qiang; Li, Zhi-Chao; Sun, Chang-Jun; Wang, Shi-Miao; Li, Xiang;
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2020
176. He, Zhiwei; Yao, Chenggui; Shuai, Jianwei; Nakano, Tadashi, Enhanced vibrational
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175. Song, Yongli; Guerrero-Juarez, Christian F.; Chen, Zhongjian; Tang, Yichen; Ma,
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Hong Qi*, Guoping Xu, Xiao-Long Peng, Xiang Li, Jianwei Shuai, and Rui Xu*. Roles of four
feedback loops in mitochondrial permeability transition pore (PTP) opening induced by Ca2+ and
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171. T Gutiérrez, Hong Qi, MC Yap, N Tahbaz, LA Milburn, E Lucchinetti, PH Lou, M Zaugg,
PG LaPointe, P Mercier, M Overduin, H Bischof, S Burgstaller, R Malli, K Ballanyi, Jianwei
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170. Xiang Li, Chuan-Qi Zhong, Zhiyong Yin, Hong Qi, Fei Xu, Qingzu He and Jianwei Shuai*.
Data-Driven Modeling Identifies TIRAP-Independent MyD88 Activation Complex and Myddosome
Assembly Strategy in LPS/TLR4 Signaling. International Journal of Molecular
Sciences, 2020, 21(9) 3061 1-15.(pdf)
169. Hong Qi,* Xiang Li, Zhen Jin, Thomas Simmen, and Jianwei Shuai*. The Oscillation
Amplitude, Not the Frequency of Cytosolic Calcium Regulates Apoptosis Induction.
iScience, 2020, 23(11): 101671.(pdf)
168. Yandong Huang, Jing Qu, Xiang Li, Fang Wei, Jinjin Zhong, Yuning Wu, Meichun Cai,
Xuejuan Gao, John E. Pearson, and Jianwei Shuai,* Anti-cross-correlation between the adjacent
open and closed durations of Markovian channels. Physical Review E. 2020, 101,
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167. Chuan-Qi Zhong,* Rui Wu, Xi Chen, Suqin Wu, Jianwei Shuai, and Jiahuai Han.*
Systematic Assessment of the Effect of Internal Library in Targeted Analysis of SWATH-MS.
Journal of Proteome Research 2020, 19, 477−492(pdf)
166. Yanping Liu, Xiang Li, Jing Qu, Xuejuan Gao, Qingzu He, Liyu Liu, Ruchuan Liu,* Jianwei
Shuai*. Motile parameters of cell migration in anisotropic environment derived by speed power
spectrum fitting with double exponential decay. Frontiers of Physics. 2020, 15:
13602 1-11(pdf)
165. Yi He, Ling Xiong, Xuejuan Gao, Miaomiao Hai, Yanping Liu, Gao Wang, Guo Chen, Jianwei
Shuai, Yang Jiao, Xixiang Zhang, Ruchuan Liu*, Liyu Liu*. Morphological quantification of
proliferation-to-invasion transition in tumor spheroids. BBA - General
Subjects. 2020, 1864: 129460 1-6(pdf)
164. Xiang Li, Hong Qi, Xiao-Cui Zhang, Fei Xu, Zhi-Yong Yin, Shi-Yang Huang, Zhao-Shou
Wang*, and Jian-Wei Shuai*. Quantitative modeling of bacterial quorum sensing dynamics in time
and space. Chin. Phys. B 2020, 29: 108702 1-8(pdf)
163. 张少杰, 尤欢欢, 林海, 钱镶玉, 何情祖, 胡桓, 熊富海, 曹玉萍, 帅建伟.
睡眠呼吸暂停的人工智能分析. 生物物理学, 2020, 8(1): 1-17.(pdf)
162. 尤欢欢, 张少杰, 林海, 钱镶钰, 何情祖, 胡桓, 屈静, 熊富海, 帅建伟. 骨科康复医疗领域知识图谱建立及其分析.
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161.袁钦湄，王星，帅建伟，林海，曹玉萍. 基于人工智能技术的抑郁症研究进展. 中国临床心理学杂志，2020，28(1)：82-86。(pdf)
160. 袁钦湄，洪志令，王星，帅建伟，曹玉萍. 人工智能在精神疾病中的应用与展望.
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2019
159. Mohanbabu Bharathi, Zhiwei Wang, Bingrui Guo, Babu Balraj, Qiuhong Li,
Jianwei Shuai and Donghui Guo*, Memristors: Understanding, Utilization and Upgradation for
Neuromorphic Computing, Nano (2020), 15(11): 2030004,
https://doi.org/10.1142/S1793292020300054(pdf)
158.Ling Xiong, Yanping Liu, Ruchuan Liu, Wei Yuan, Gao
Wang, Yi He, Jianwei Shuai, Yang Jiao, Xixiang Zhang, Weijing Han, Junle Qu, Liyu Liu.
Quantitative heterogeneity and subgroup classification based on motility of breast cancer cells.
Chinese Physics B. 2019, 28(10): 108701 . doi: 10.1088/1674-1056/ab3af4(pdf)
157. Xuejuan Gao†, Yanfeng Zhao†, Yi
Bao†, Wei Yin, Liyu Liu, Ruchuan Liu, Zhengquan Yu, Xiao Zhou*, Jianwei Shuai*. Poor Prognosis
with Coexistence of EGFR T790M Mutation and Common EGFR-activating Mutation in Non-Small Cell
Lung Cancer. Cancer Management and Research. 2019, 11: 9621-9630 (pdf)
156. Chenggui Yao, Zhiwei He, Tadashi Nakano, Yu Qian, Jianwei Shuai*.
Inhibitory-autapse-enhanced signal transmission in neural networks. Nonlinear
Dynamics. 2019, 97: 1425-1437. https://doi.org/10.1007/s11071-019-05060-z (pdf)
155. Xuejuan Gao†, Junjie Zhu†, Linsong Chen†, Yan Jiang, Xiao Zhou, Jianwei Shuai*, Yanfeng
Zhao*. Clinical And Imageological Features Of Lung Squamous Cell Carcinoma With EGFR Mutations.
Cancer Management and Research. 2019, 11: 9017-9024. (pdf)
154. 徐富献，王抒伟，钱镶钰，胡桓，何情祖，林海，帅建伟. 睡眠自动分期方法综述. 生物物理学, 2019, 2018, 6(2),
7-30 (pdf)
153. Sten Rüdiger and Jianwei Shuai. Modeling of Stochastic Ca2+ Signals. Book:
Computational Glioscience, Editors: Maurizio De Pittà, Hugues Berry. Publisher: Springer, Cham.
Springer Nature Switzerland AG 2019, Print ISBN 978-3-030-00815-4, Online ISBN
978-3-030-00817-8, DOI https://doi.org/10.1007/978-3-030-00817-8. (pdf)
152. 王抒伟，徐富献，钱镶钰，胡桓，何情祖，林海，帅建伟. 应用深度神经网络对多导睡眠图的睡眠分期研究. 生物物理学, 2019, 7(2):
11-25. DOI: 10.12677/biphy.2019.72002(pdf)
151. Y Tian, J Xu, Y Li, R Zhao, S Du, C Lv, W Wu, R Liu, X Sheng, Y Song, X Bi, G Li, M Li,
X Wu, P Lou, H You, W Cui1, J Sun, Jianwei Shuai, F Ren, B Zhang, M Guo, X Hou, K Wu, L Xue, H
Zhang, MV Plikus, Y Cong, CJ Lengner, Z Liu, Zhengquan Yu. MicroRNA-31 Reduces Inflammatory
Signaling and Promotes Regeneration in Colon Epithelium, and Delivery of Mimics in Microspheres
Reduces Colitis in Mice. Gastroenterology, 2019, 1-16.
https://doi.org/10.1053/j.gastro.2019.02.023 (pdf)
2018
150 Hang Xie, Yang Jiao, Qihui Fan, Miaomiao Hai, Jiaen Yang, Zhijian Hu, Yue
Yang, Jianwei Shuai, Guo Chen, Ruchuan Liu*, Liyu Liu*. Modeling three-dimensional invasive
solid tumor growth in heterogeneous microenvironment under chemotherapy. PLOS
ONE, 2018, 13(10): e0206292. https://doi.org/10.1371/journal.pone.0206292(pdf)
149. 张晓翠，黄世阳，李翔，刘艳平，吴宇宁，帅建伟*，王兆守*. 细菌群体感应机制的动力学建模研究. 生物物理学, 2018, 6(2),
7-30 (pdf)
148. Chenggui Yao, Zhiwei He, Tadashi Nakano, and Jianwei Shuai. Spiking patterns of a
neuron model to stimulus: Rich dynamics and oxygen’s role. Chaos 28, 083112
(2018) (pdf)
147. Xiang Li, Yuning Wu, Xuejuan Gao, Meichun Cai, and Jianwei Shuai. Wave failure at
strong coupling in intracellular Ca2+ signaling system with clustered channels. Physical
Review E 2018, 97: 012406 (pdf)
146. Hong Qi, Yu Jiang, Zhiyong Yin, Ke Jiang, Linxi Li and Jianwei Shuai. Optimal pathways
for the assembly of the Apaf-1.cytochrome c complex into apoptosome. Physical Chemistry
Chemical Physics 2018, 20: 1964 (pdf)
2017
145. Chenggui Yao, Meng Zhan, Jianwei Shuai, Jun Ma, and Jurgen Kurths.
Insensitivity of synchronization to network structure in chaotic pendulum systems with
time-delay coupling. Chaos 2017, 27: 126702(pdf)
144. Yanping Liu, Xiaocui Zhang，Yuling Wu，Wen Liu，Xiang Li, Ruchuan Liu, Liyu Liu, Jianwei
Shuai. The derivation of persistent times for anisotropic migration of cells. Chinese
Physics B 2017, 26: 128707 (pdf)
143. Xiang Li, Jingjing Zhong, Xuejuan Gao, Yuning Wu, Jianwei Shuai, and Hong Qi. The
biexponential distribution of open times of a toy channel model. Chinese Physics
B 2017, 26: 128703 (pdf)
142. 牛帅, 帅建伟, 祁宏. Bcl-2蛋白抑制钙信号的建模与全局动力学分析. 物理学报 2017, 66:
238701
Selected as one of 3 recommended papers of Acta Physica Sinica Vol.66(23) 2017(pdf)
http://wulixb.iphy.ac.cn/CN/volumn/volumn_1917.shtml
141. Cong Lv, Fengyin Li, Xiang Li, Yuhua Tian, Yue Zhang, Xiaole Sheng, Yongli Song,
Qingyong Meng, Shukai Yuan, Liming Luan, Thomas Andl, Xu Feng, Baowei Jiao, Mingang Xu, Maksim
Plikus, Xing Dai, Christopher Lengner, Wei Cui, Fazheng Ren, Jianwei Shuai, Sarah Millar, and
Zhengquan Yu. MiR-31 promotes mammary stem cell expansion and breast tumorigenesis by
suppressing Wnt signaling antagonists. Nature Communications 2017, 8:
1036 (pdf)
140. Yongfei Cai, Mingyang Su, Ahmad Ashfaq, Xiaojie Hu, Jiayan Sang, Lingyuan Kong,
Xingqiang Chen, Chen Wang, Jianwei Shuai and Aidong Han*. Conformational dynamics of the
essential sensor histidine kinase WalK. Acta Crystallographica Section D 2017,
73: 793-803 (pdf)
139. Yuhua Tian, Xianghui Ma, Cong Lv, Xiaole Sheng, Xiang Li, Ran Zhao, Yongli Song, Thomas
Andl, Maksim V Plikus, Jinyue Sun, Fazheng Ren, Jianwei Shuai, Christopher J Lengner, Wei Cui,
Zhengquan Yu. Stress responsive miR-31 is a major modulator of mouse intestinal stem cells
during regeneration and tumorigenesis. eLife. 2017, 6: e29538. DOI:
10.7554/eLife.29538(pdf)
138. Fang Wei, Xiang Li, Meichun Cai, Yanping Liu,
Peter Jung, Jianwei Shuai1. Regulation of 1, 4, 5-triphosphate receptor channel gating dynamics
by mutant presenilin in Alzheimer's disease cells. Frontier of Physics 12(3),
128702 (2017) (pdf)
137. Xianghui Ma, Yuhua Tian, Yongli Song, Jianyun Shi, Jiuzhi Xu, Kai Xiong, Jia Li, Wenjie
Xu, Yiqiang Zhao, Jianwei Shuai, Lei Chen, Maksim V. Plikus, Christopher J. Lengner, Fazheng
Ren, Lixiang Xue, Zhengquan Yu. Msi2 maintains quiescent state of hair follicle stem cells by
directly repressing the Hh signaling pathway. Journal of Investigative
Dermatology 2017, 137: 1015-1024(pdf)
2016
136. Yuan Chen, Hong Qi, Xiang Li, Meichun Cai, Xingqiang Chen, Wen Liu, and
Jianwei Shuai. Suppressing effect of Ca2+ blips on puff amplitudes by inhibiting channels to
prevent recovery. Phys. Rev. E 2016, 94: 022411(pdf)
135. Xiuhong Cai, Xiang Li, Hong Qi, Fang Wei, Jianyong Chen, and Jianwei Shuai, Comparison
of gating dynamics of different IP3R channels with immune algorithm searching for channel
parameter distributions. Physical Biology 2016, 13: 056005 1-12(pdf)
134. Qi Zhao, Hongsheng Liu, Chenggui Yao, Jianwei Shuai, and Xiaoqiang Sun. Effect of
dynamic interaction between microRNA and transcription factor on gene expression. BioMed
Research International 2016, 2016: 2676282 1-11 (pdf)
133. Xiang Li, Feng Liu, Jianwei Shuai. 癌细胞信号网络动力学研究. 物理学报 2016, 65: 178704
1-14 (pdf)
132. Yuan Chen, Hong Qi, Xiang Li, and Jiangwei Shuai. 钙离子通道和钙信号震荡模型研究.
生物物理学 2016, 4: 1-26(pdf)
131. Xiang Li, Yuan Chen, Hong Qi, Liyu Liu, Jianwei Shuai. Synonymous mutations in
oncogenesis and apoptosis versus survival unveiled by network modeling.
Oncotarget 2016, 7: 34599-34616 (pdf)
130. Anqi Ling, Yandong Huang, Jianwei Shuai, and Yueheng Lan. Channel based generating
function approach to the stochastic Hodgkin-Huxley neuronal system. Scientific
Reports 2016, 6: 22662 1-12(pdf)
129. Hong Qi, Jianwei Shuai. Alzheimer's disease via enhanced calcium signaling caused by
the decrease of endoplasmic reticulum–mitochondrial distance. Medical
Hypotheses 89 (2016) 28–31(pdf)
2015
128.Yandong Huang, StenRuediger, and Jianwei Shuai. Accurate Langevin
approaches to simulate Markovian channel dynamics. Physical Biology 12 (2015)
061001 1-22
Slected as one of 10 papers of Physical Biology Highlight of 2015(pdf)
http://iopscience.iop.org/journal/1478-3975/page/Highlights%20of%202015
127. Ashfaq Ahmad, Yongfei Cai, Xingqiang Chen, Jianwei Shuai, Aidong Han. Conformational
Dynamics of Response Regulator RegX3 from Mycobacterium tuberculosis. PLOS One,
2015, 0133389 1-18(pdf)
126. Xiaopeng Hu, Zhenzhou Tang, Yang Li, Wensheng Liu, Shuang Zhang, Bingyan Wang,
YingpuTian, Yinan Zhao, Hao Ran, Wenjie Liu, Gen-Sheng Feng, Jianwei Shuai, Haibin Wang*
&Zhongxian Lu. Deletion of the tyrosine phosphatase Shp2 in Sertoli cells causes infertility
in mice. Scientific Reports 5 (2015) 12982 1-15 (pdf)
125. Chenggui Yao, Zhiwei He, JinmingLuo, and Jianwei Shuai. Resonance induced by a
spatially periodic force in the reaction-diffusion system. Physical Review E
2015, 91, 052901 1-6(pdf)
124. Yandong Huang, Xiang Li, and Jianwei Shuai. Langevin approach with rescaled noise for
stochastic channel dynamics in Hodgkin-Huxley neurons. Chinese Physics B 24
(2015) 120501 (pdf)
123. Xing-Xing Wu and Jianwei Shuai. Effects of extracellular potassium diffusion on
electrically coupled neuron networks. Physical Review E 91 (2015) 022712 1-10 (pdf)
122. Hong Qi, Linxi Li and Jianwei Shuai. Optimal microdomain corsstalk between endoplasmic
reticulum and mitochondria for Ca2+ oscillations. Scientific Reports 5 (2015)
7984 1-11 (pdf)
121. Xing-Xing Wu, Chenggui Yao and Jianwei Shuai. Enhanced multiple vibrational resonances
by Na+ and K+ dynamics in a neuron model. Scientific Reports 5 (2015) 7684
1-10 (pdf)
2014
120. Hong Qi, Yandong Huang, Sten Ruediger, and Jianwei Shuai. Frequency and
Relative Prevalence of Calcium Blips and Puffs in a Model of Small IP3R Clusters.
Biophysical Journal 106 (2014) 2353-2363 (pdf)
119. 莫有斌，林海，帅建伟. HIV感染－免疫动力学的元胞自动机模拟研究. 生物物理学 2 (2014) 1-13 (pdf)
118. Xiang Li, Jiqian Zhang, and Jianwei Shuai. Isoprenaline, a potential contributor in
sick sinue syndrome: insights from a mathematical model of the rabbit sinoatrial node.
The Scientific World Journal 2014 (2014) 540496 1-11(pdf)
117. Youbin Mo, Bin Ren, Weicao Yang, and Jianwei Shuai. The 3-dimensional cellular automata
for HIV infection. Physica A 399 (2014) 31-39 (pdf)
2013
116. 蔡秀红，魏芳，陈剑勇，董斯瑜，帅建伟. 应用免疫算法研究肌醇1,4,5-磷酸三酯受体通道模型参数分布特性.
生物物理学报 29 (2013) 937-948 (pdf)
115. Chenggui Yao, Ming Yi, and Jianwei Shuai. Time delay induced different synchronization
patterns in repulsively coupled chaotic oscillators. Chaos, 23 (2013) 033140
1-7 (pdf)
114. Yandong Huang, Sten Ruediger, and Jianwei Shuai. Langevin approach for stochastic
Hodgkin-Huxley dynamics with discretization of channel open fraction. Physics Letters
A, 377 (2013) 3223-3227 (pdf)
113. Yandong Huang and Jianwei Shuai. Induced dipoles incorportated into all-atom Zn protein
simulation with multiscale modeling. The Journal of Physical Chemistry B 117
(2013) 6138-6148 (pdf)
112. 祁宏，帅建伟. IP3R钙离子通道集团中的Blip动力学 中国科技论文 8 (2013) 534-537 (pdf)
111. Yandong Huang, Sten Ruediger, and Jianwei Shuai. Channel-based Langevin approach for
the stochastic Hodgkin-Huxley neuron. Physical Review E 87 (2013) 012716
1-9 (pdf)
2012
110. Tadashi Nakano, Michael J Moore, Fang Wei, Athanasios V Vasilakos and Jianwei Shuai.
Molecular Communication and Networking: Opportunities and Challenges. IEEE Transactions
on Nanobioscience 11 (2012) 135-148
Listed as the No.1 of the Popular
Articles in IEEE Transactions on Nanobioscience (Dec 2013).(pdf)
(A copy of the website on Dec 6, 2013)
109. Xing-Xing Wu and JW Shuai. Multistability in a neuron model with extracellular
potassium dynamics. Physical Review E 85 (2012) 061911 1-9 (pdf)
108. S Ruediger, P Jung and JW Shuai. Termination of Ca2+ release for clustered IP3R
channels. PLoS Computational Biology 8 (2012) e1002485 1-13 (pdf)
Related comments from Faculty of 1000:
http://f1000.com/717347975
107. 帅建伟、吴星星. 离子通道小尺寸团簇的随机动力学和熵效应. 神经信息学与计算神经科学的前沿问题－第367次香山会议文集 (pdf)
2011
106.
Yandong Huang, Sten Ruediger, and JW Shuai. Modified Langevin approach for a stochastic calcium
puff model. European Physical Journal B 83 (2011) 401-407 (pdf)
105. Rong Sheng and JW Shuai. Neuronal modeling with intracellular calcium signaling.
Acta Physiologica Sinica 63 (2011) 442-452 (pdf)
104. Ian Smith, JW Shuai and Ian Parker. Active generation and propagation of calcium
signals within tunneling membrane nanotubes. Biophysical Journal 100 (2011)
L37-L39 (pdf)
103. 吴晨旭、帅建伟、Holger Merlitz. 软物质体系动力学特性及生物体系物质与信号的传输. 厦门大学学报--自然科学版
(厦大90周年校庆专刊), 50 (2011) 239 (pdf)
102. Fang Wei and JW Shuai. Intercellular calcium waves in glial cells with bistable
dynamics. Physical Biology, 8 (2011) 026009 (pdf)
101. Hai Lin, Dong-Ping Yang, J.W. Shuai. Cooperation among mobile individuals with payoff
expectations in the spatial prisoner's dilemma game. Chaos, Solitons &
Fractals, 44 (2011) 153-159 (pdf)
100. Dongping Yang, Hai Lin, and JW Shuai. Coevolution of cooperation and network structure
under natural selection. Europhysics Letters, 93 (2011) 48001 (pdf)
99. Fang Wei, Dongping Yang, Ronny Straube and Jianwei Shuai. Brownian Diffusion of Ion
Channels in Different Membrane Patch Geometries. Physical Review E, 83 (2011)
021919 1-9 (pdf)
98. Rong Sheng, Sten Rüdiger, and Jianwei Shuai. Coherent calcium puff signals driven by
intracellular noises. Physica A, 390 (2011) 1117-1123 (pdf)
2010
97. S Rüdiger, J W Shuai and IM Sokolov. Law of mass action, detailed balance,
and the modeling of calcium puffs. Physical Review Letters, 105 (2010) 048103
1-4 (pdf)
Related comments from Faculty of 1000:
http://f1000.com/5659956
96. T Nakano, JW Shuai, T Koujin, T Suda, Y Hiraoka, and T Haraguchi. Biological excitable
media based on non-excitable cells and calcium signaling. Nano Communication
Networks, 1 (2010) 43-49 (pdf)
95. S Rüdiger, C. Nagaiah, G. Warnecke and J W Shuai. Calcium domains around single and
clustered IP3 receptors and their modulation by buffers. Biophysical Journal,
99 (2010) 3-12 (pdf)
94. J. W. Shuai, R. Sheng, and P. Jung. Entropically modified spiking ability and
periodicity in clustered channels. Physical Review E, 81 (2010) 051913 1-7(pdf)
93. Hai Lin and J. W. Shuai. A stochastic spatial model of HIV dynamics with an asymmetric
battle between virus and immune system. New Journal of Physics, 12 (2010)
043051 1-18 (pdf)
Related comments:
(1) From Physics World:
http://physicsworld.com/cws/article/news/42515
(2) From
Institute of Physics:
http://www.iop.org/news/apr10/page_43372.html
(3) The above two
comments are also posted in the following websites:
http://www.sciencedaily.com/releases/2010/04/100429082347.htm
http://bulletin.sciencebusiness.net/ebulletins/showissue.php3?page=/548/art/17802
http://www.hivworkshop.com/2010%20news/may/may10-1-1.htm
http://www.daneshju.ir/forum/f477/t94112.html
(4) The paper is
listed as ‘Best of 2010’ in the New Journal of Physics:
http://iopscience.iop.org/1367-2630/page/Best%20of%202010
92. J. W. Shuai, Y. D. Huang, and S Rüdiger. Puff-wave transition in an inhomogeneous model
for calcium signals. Physical Review E, 81 (2010) 041904 1-8 (pdf)
2009
91. Ian F Smith, Steven M Wiltgen, Jianwei Shuai and Ian Parker. Ca2+ puffs
originate from pre-established stable clusters of inositol trisphosphate receptors.
Science Signaling, 2 (2009) p. ra77
The Online Full Text: http://stke.sciencemag.org/cgi/content/abstract/sigtrans;2/98/ra77.
Editor’s
Summary: No Assembly Required: http://stke.sciencemag.org/cgi/content/summary/sigtrans;2/98/ra77
90. J. W. Shuai, Dongping Yang, J. E. Pearson, and S. Rüdiger. An investigation of models of
the IP3R channel in Xenopus Oocyte. Chaos, 19 (2009) 037105 1-11 (pdf)
89. Dong-Ping Yang, Hai Lin, Chen-Xu Wu, and J. W. Shuai. Effect of mortality selection on
the emergence of cooperation with network dynamics. New Journal of Physics, 11
(2009) 073048 1-13 (pdf)
88. Dongping Yang, Hai Lin, Chen-Xu Wu and J W Shuai. Modelling moran process with network
dynamics for the evolution of cooperation. Chinese Physics Letters, 26 (2009)
68902 1-4 (pdf)
87. X L Liao, P Jung, and J W Shuai. Global noise and oscillations in clustered excitable
media. Physical Review E, 79 (2009) 41923 1-6 (pdf)
86. Dongping Yang, J W Shuai, Hai Lin and Chenxu Wu. Individual’s strategy characterized by
local topology conditions in prisoner’s dilemma on scale-free networks. Physica
A, 388 (2009) 2750-2756 (pdf)
2008
85. J W Shuai, J E Pearson, and I Parker. Modeling Ca2+ feedback on a single
inositol 1,4,5trisphosphate receptor and its modulation by Ca2+ buffers. Biophysical
Journal, 95 (2008) 3738-3752(pdf)
2007
84. S. Rüdiger, J W Shuai, W Huisinga, C Nagaiah, G Warnecke, I Parker, and M Falcke. Hybrid
Stochastic and Deterministic Simulations of Calcium Blips. Biophysical Journal,
93 (2007) 1847-1857 (pdf)
83. J W Shuai, J E Pearson, J K Foskett, D D Mak, and I Parker. A Kinetic Model of Single
and Clustered IP3 Receptors in the Absence of Ca2+ Feedback. Biophysical
Journal, 93 (2007) 1151-1162(pdf)
82. L. Ionescu, C. White, K-H. Cheung, J W Shuai, I. Parker, J. E. Pearson, J. K. Foskett,
and D-O.O. Mak. Mode switching is the major mechanism of ligand regulation of InsP3 receptor
calcium release channels. Journal of General Physiology, 130 (2007) 631-645.(pdf)
2006
81. J W Shuai, H J Rose and I Parker. The number and spatial distribution of
IP3R receptors underlying calcium puffs in Xenopus oocytes. Biophysical
Journal, 91: 4033-4044 (2006) (pdf)
80. H J Rose, S Dargan, J W Shuai and I Parker. Trigger events preceding calcium puffs in
Xenopus oocytes. Biophysical Journal, 91: 4024-4032 (2006) (pdf)
Related comments from Faculty of 1000:
http://f1000.com/1047479
79. J W Shuai and P Jung. The dynamics of small excitable ion channel clusters.
Chaos, 16: 26104 1-10 (2006).(pdf)
2005
78. J W Shuai and P Jung. Entropically enhanced excitability in small systems.
Physical Review Letters, 95: 114501 1-4 (2005) (pdf)
77. J W Shuai and I Parker. Optical single-channel recording by imaging Ca2+ flux through
individual ion channels: theoretical considerations and limits to resolution. Cell
Calcium, 37: 283-299 (2005) (pdf)
2004
76. J Lian, J W Shuai, and D M Durand. Control of Phase Synchronization of Neuronal Activity
in the Rat Hippocampus. Journal of Neural Engineering, 1: 46-54 (2004)(pdf)
Related ‘News and Analysis’ from the magazine Physics
World – April 2004
75. J Y Chen, K W Wong, and J W Shuai. Phase synchronization between two different
oscillators with unidirectional signal coupling. International Journal of Bifurcation
and Chaos, 14: 1877-1884 (2004) (pdf)
74. J W Shuai and P Jung. Langevin Modeling of Intracellular Calcium Dynamics. In "Function
and Regulation of Cellular Systems: Experiments and Models". Edited by A. Deutsch, J. Howard, M.
Falcke and W. Zimmermann. Birkhaeuser Verlag Basel (2004).(pdf)
73. J W Shuai, S Nadkarni, P Jung, A H Cornell-Bell, and V Trinkaus-Randall. Mathematical
Modeling of Intracellular and Intercellular Calcium Signaling. Advances in Molecular and
Cell Biology 31 (2004) 689-706 (pdf)
2003
72. J W Shuai and P Jung. Optimal ion channel clustering for intracellular
calcium signaling. Proceedings of the National Academy of Sciences of USA, 100:
506-510 (2003) (pdf)
71. J W Shuai and D M Durand. Strange nonchaotic attractor in high-dimensional neural
system. International Journal of Bifurcation and Chaos, 13: 251-260 (2003) (pdf)
70. J W Shuai, M Bikson, P J Hahn, J Lian and D M Durand. Ionic mechanisms underlying
spontaneous CA1 neuronal firing in calcium free solution. Biophysical Journal,
84: 2099-2111 (2003) (pdf)
69. J W Shuai and P Jung. Selection of Intracellular Calcium Patterns in a Model with
Clustered Ca2+ Release Channels. Physical Review E, 67: 031905 (2003)(pdf)
68. J W Shuai and P Jung. Sub-threshold Ca2+ waves.
New Journal of Physics, 5: 132.1-132.20 (2003) (pdf)
67. J W Shuai and P Jung. Statistical Properties of Ca2+ Puffs. Nova Acta Leopoldina
NF 88, Nr. 332, 8211 (2003)(pdf)
66. J W Shuai and P Jung. Langevin Modeling of Intracellular Calcium Signaling. In “Lecture
Notes in Physics: Understanding Calcium Dynamics: Experiment and Theory” Vol. 623, 231-252.
Edited by M Falcke and D Malchow, Springer-Verlag Heidelberg (2003)(pdf)
65. P Jung, S Zeng and J W Shuai. Signals from Clustered Ion Channels. Advances in
Solid State Physics, 43: 605-616 (2003). (pdf)
64. J Y Chen, K W Wong, L M Cheng and J W Shuai. A Secure Communication Scheme Based on
Phase Synchronization of Chaotic Systems. Chaos, 13: 508-514 (2003) (pdf)
2002
63. J W Shuai and P Jung. Optimal Intracellular Calcium Signaling.
Physical Review Letters, 88: 68102 1-4 (2002) (pdf).
62. J W Shuai and P Jung. Stochastic Properties of Ca2+ Release of Inositol
1,4,5-Trisphosphate Receptor Clusters. Biophysical Journal, 83 (2002) 87-97 (pdf)
61. J Y Chen, K W Wong, and J W Shuai. The n:m phase synchronization with mutual coupling
phase signals. Chaos, 12 (2002) 100-106 (pdf)
60. J Y Chen, K W Wong, H Y Zheng and J W Shuai. The coupling of dynamics in coupled map
lattices. Discrete Dynamics in Nature and Society, 7 (2002) 157-160.(pdf)
59. J W Shuai and P Jung. Coherence Resonance: On the Use and Abuse of the Fano Factor.
Fluctuation and Noise Letters, 2 (2002) L137-L144. (pdf)
58. J Y Chen, K W Wong, and J W Shuai. Phase synchronization in coupled chaotic oscillators
with time delay. Physical Review E, 66 (2002) 056203-1 – 056203-7. (pdf)
2001
57. J W Shuai and K W Wong. Reply to comment on Simple approach to the creation
of a strange nonchaotic attractor in any chaotic system. Physical Review E, 64
(2001) 058202-1~2 (pdf)
56. J W Shuai, J Lian, P J Hahn, and D M Durand. Positive Lyapunov exponents calculated from
time series of strange nonchaotic-attractors. Physical Review E, 64 (2001)
026220-1 ~ 026220-5. (pdf). Erratum: Positive Lyapunov exponents from time series of strange
nonchaotic system. Physical Review E, 66 (2002) 039903. (pdf)
55. J Y Chen, K W Wong, and J W Shuai. Properties of phase locking with weak phase-coherent
attractors. Physics Letters A, 285 (2001) 312-318 (pdf)
54. J Lian, J W Shuai, and D M Durand. Nonlinear dynamic properties of low calcium induced
epileptiform activity. Brain Research, 890 (2001) 246-254 (pdf)
53. P Jung and J W Shuai. Optimal sizes of ion channel clusters. Europhysics
Letters, 56 (2001) 29-35 (pdf)
52. J Lian, M Bikson, J W Shuai, and D M Durand. Propagation of non-synaptic epileptiform
activity across a lesion in rat hippocampal slices. Journal of Physiology
(London) 537 (2001) 191-199 (pdf)
51. J Y Chen, K W Wong and J W Shuai. Phase signal coupling induced n:m phase
synchronization in drive-response oscillators. Physical Review E, 63 (2001)
036214 (pdf)
50. J Y Chen, K W Wong, H Y Zheng, and J W Shuai. Intermittent phase synchronization of
coupled spatiotemporal chaotic systems. Physical Review E, 64 (2001) 016212-1 ~
7 (pdf)
49. J Y Chen, K W Wong, H Y Zheng, and J W Shuai. Synchronizing spatiotemporal chaos by
introducing a finite flat region in the local map. Discrete Dynamics in Nature and
Society, 6 (2001) 201-206(pdf)
2000
48. J W Shuai, Y Kashimori,, T Kambara, and M Naito. Truncated chaotic
trajectories in periodically driven systems with largely converging dynamics. Physics
Letters A, 267 (2000) 335-341. (pdf)
47. J W Shuai and D M Durand. Strange nonchaotic attractor in low-frequency
quasiperiodically driven systems. International Journal of Bifurcation and
Chaos, 10 (2000) 2269-2276. (pdf)
46. J Y Chen, K W Wong, Z X Chen, S C Xu and J W Shuai. Phase synchronization in discrete
chaotic systems. Physical Review E, 61 (2000) 2559-2562 (pdf)
1999
45. J W Shuai and K W Wong. Simple approach to the creation of a strange nonchaotic
attractor in any chaotic system. Physical Review E, 59 (1999) 5338-5343 (pdf)
44. J W Shuai, Y Kashimori, T Kambara, and G v d Emde. Eectroreceptor model of weakly
electric fish Gnathonemus Petersii: II. Cellular origin of inverse waveform tuning. Biophysical
Journal, 76 (1999) 3012-3025 (pdf)
43. J W Shuai and D M Durand. Phase synchronization in two coupled chaotic neurons. Physics
Letters A, 264 (1999) 289-297 (pdf)
42. J Y Chen, K W Wong and J W Shuai. Finding the Chaotic Synchronizing State with Gradient
Descent Algorithm. Physics Letters A, 263 (1999) 315-322 (pdf)
1998
41. J W Shuai and K W Wong. Noise and synchronization in chaotic neural
networks. Physical Review E, 57 (1998) 7002-7007 (pdf)
40. J Y Chen, Z X Chen, J W Shuai, Y Y Lu, D H Guo, and Z X Chen. A chaotic lattice and the
circuit of its unit. Canadian Journal of Physics, 76 (1998) 801-808
39. J W Shuai and K W Wong. Nonchaotic attractors with highly-fluctuating finite-time
Lyapunov exponents. Physical Review E, 57 (1998) 5332-5336 (pdf)
38. J W Shuai, Y Kashimori, and T Kambara. Electroreceptor model of the weakly electric fish
Gnathonemus Petersii: I. The model and the origin of differences between A- and B-receptors.
Biophysical Journal, 75 (1998) 1712-1726 (pdf)
37. 陈建勇, 陈振湘, 郭东辉, 帅建伟. 一种混沌神经网络的简单电路兑现. 量子电子学报, 15 (1998) 356-361 (pdf)
1997
36. J W Shuai, Z X Chen, R T Liu, and B X Wu. Maximum hyperchaos in chaotic
nonmonotonic neuronal networks. Physical Review E, 56 (1997) 890-893 (pdf)
35. J W Shuai, K W Wong, and L M Cheng. Synchronization of spatiotemporal chaos with
positive conditional Lyapunov exponents. Physical Review E, 56 (1997) 2272-2275 (pdf)
34. J W Shuai, Z X Chen, R T Liu, and B X Wu. A simple way to determine the connecting of a
multilinear neural network. Physics Letters A, 227 (1997) 94-96 (pdf)
33. J W Shuai, Z X Chen, R T Liu, and B X Wu. Three-dimensional rotation neural network.
Physica A, 238 (1997) 23-38 (pdf)
32. J C Zheng, J Y Chen, J W Shuai, S H Cai, and R Z Wang. Storage capacity of the Hopfield
neural network. Physica A, 246 (1997) 313-319 (pdf)
31. 陈建勇, 陈振湘, 郑金成, 帅建伟. 非单调混沌神经元的电路实现. 半导体光电, 18 (1997) 302-306 (pdf)
1996
30. J W Shuai, Z X Chen, R T Liu, and B X Wu. A chaotic neural network model.
Chinese Physics Letters, 13 (1996) 185-188
29. J W Shuai, Z X Chen, R T Liu, and B X Wu. Self evolution neural network. Physics Letters
A, 221 (1996) 311-316 (pdf)
28. Z X Chen, J W Shuai, R T Liu and B X Wu. Hamilton number neural network model.
Semiconductor Photonics and Technology, 2 (1996) 1-5
27. Z X Chen, J W Shuai, J C Zheng, R T Liu, and B X Wu. The storage capacity of the complex
phase neural network. Physica A, 225 (1996) 157-163 (pdf)
26. Z G Xu, Z X Chen, A N Ji, and J W Shuai. Electro-luminescence device to implement the
clipped Hopfield neural network. Semiconductor Photonics and Technology, 2 (1996) 124-129
25. 帅建伟，陈振湘，刘瑞堂，吴伯僖. 四元数神经网络模型的计算机模拟研究. 红外与毫米波学报, 15 (1996) 50-54 (pdf)
24. 陈振湘, 帅建伟, 郑金成, 刘瑞堂. 三维转动神经网络的研究: (1) 能量函数. 厦门大学学报--自然科学版, 35 (1996) 343-347 (pdf)
23. 陈振湘, 帅建伟, 郑金成, 刘瑞堂. 三维转动神经网络的研究: (2) 存储容量. 厦门大学学报--自然科学版, 35 (1996) 511-514 (pdf)
22. 郑金成, 帅建伟, 陈振湘, 刘瑞堂, 吴伯僖. 应用信噪比理论分析复相角神经网络的存储容量. 量子电子学 13 (1996) 372-377 (pdf)
21. 郑金成, 帅建伟, 王仁智，陈振湘. Hopfield神经网络的存储容量. 自然杂志 18 (1996) 245-246 (pdf)
20. 郑金成, 帅建伟, 陈振湘, 刘瑞堂, 吴伯僖. 应用信噪比理论分析三维转动角神经网络模型的存储容量. 自然杂志 18 (1996) 53 (pdf)
19. 郑金成, 帅建伟，王仁智，陈振湘. Hopfield神经网络的存储容量. 半导体光电, 17 (1996) 338-341 (pdf)
1995
18. Z X Chen, J W Shuai, R T Liu, and B X Wu. The stability of the 2n-element number neural
network models. Physica A, 218 (1995) 291-297 (pdf)
17. J W Shuai, Z X Chen, R T Liu, and B X Wu. Storage capacity of complex Hopfield model.
Semiconductor Photonics and Technology, 1 (1995) 35-42
16. J W Shuai, Z X Chen, R T Liu, and B X Wu. The Hamilton neural network model. Physica A,
216 (1995) 20-31 (pdf)
15. J W Shuai, Z X Chen, R T Liu, and B X Wu. The 2n-element number neural network model:
recognition of the multistate patterns. Journal of Modern Optics, 42 (1995) 1179-1188
14. J W Shuai, Z X Chen, R T Liu, and B X Wu. Hamilton neural network model: recognition of
the color patterns. Applied Optics, 34 (1995) 6764-6768 (pdf)
13. 帅建伟，陈振湘，刘瑞堂，吴伯僖. 八元数神经网络模型：256色图像的识别. 光学学报. 15 (1995) 877-882 (pdf)
12. 帅建伟，陈振湘，刘瑞堂，吴伯僖. 四元数神经网络模型：彩色图像的识别. 计算机学报. 18 (1995) 372-379 (pdf)
11. 帅建伟，陈振湘，刘瑞堂，吴伯僖. 离散复数神经网络模型. 科技通报 11 (1995) 203-208 (pdf)
10. 帅建伟，陈振湘，刘瑞堂，吴伯僖. 2n 元数神经网络模型：存储容量分析. 厦门大学学报--自然科学版, 34 (1995) 353-358 (pdf)
9. 帅建伟，陈振湘，刘瑞堂，吴伯僖. 2n 元数神经网络模型: 多值图像的识别应用. 厦门大学学报--自然科学版, 34 (1995) 727-732 (pdf)
8. 帅建伟，陈振湘，刘瑞堂. 权重神经网络的光电兑现研究. 半导体光电 16 (1995) 40-42 (pdf)
7. 郑金成, 帅建伟, 陈振湘, 刘瑞堂. 复相角神经网络模型的存储容量分析. 自然杂志 17 (1995) 301-302 (pdf)
6. 陈振湘，帅建伟，刘瑞堂，吴伯僖. 运用四元数神经网络模型识别16色彩色字符. 模式识别与人工智能 8 (1995) 101-105 (pdf)
5. 陈振湘，帅建伟，刘瑞堂，吴伯僖. 异步四元数神经网络模型的能量函数研究. 量子电子学报, 12 (1995) 262-267 (pdf)
4. 陈振湘，帅建伟，纪安妮. 粉末电致发光器件的新应用: 一种光神经器件. 光电子技术 1 (1995) 68-71 (pdf)
3. 陈振湘，帅建伟，刘瑞堂. 异步复相角神经网络模型的能量函数研究. 厦门大学学报--自然科学版, 34 (1995) 898-903 (pdf)
1994
2. 帅建伟，陈振湘，刘瑞堂，吴伯僖. 对二次函数切割的分形研究.
厦门大学学报--自然科学版, 33 (1994) 880-882 (pdf)
1993
1. 帅建伟，陈坚令，洪秀霞，吴伯僖. 电致发光屏界面的阻抗谱和分形研究. 厦门大学学报--自然科学版, 32 (1993) 424-429
(pdf)
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